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  5. Dde_g13713

Dde_g13713 (APUM12, PUM12)


Aliases : APUM12, PUM12

Description : not classified & original description: none


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g13713

Target Alias Description ECC score Gene Family Method Actions
AT5G56510 APUM12, PUM12 pumilio 12 0.04 OrthoFinder output from all 47 species
Azfi_s0040.g026500 APUM12, PUM12 not classified & original description: CDS=1-2874 0.04 OrthoFinder output from all 47 species
Dac_g02900 APUM12, PUM12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os12g30520.1 APUM12, PUM12,... Pumilio homolog 12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002092 APUM12, PUM12 not classified & original description: CDS=226-2811 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 651 672
IPR001313 Pumilio_RNA-bd_rpt 762 778
IPR001313 Pumilio_RNA-bd_rpt 724 757
IPR001313 Pumilio_RNA-bd_rpt 691 721
IPR001313 Pumilio_RNA-bd_rpt 797 830
IPR001313 Pumilio_RNA-bd_rpt 840 854
IPR001313 Pumilio_RNA-bd_rpt 614 646
IPR001313 Pumilio_RNA-bd_rpt 578 610
No external refs found!