1. Home
  2. Species
  3. Davallia denticulata
  4. Sequence
  5. Dde_g13612

Dde_g13612


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g13612
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
Adi_g055309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20462 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25758 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33378 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03222 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04899 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05723 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09716 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19609 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.02 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.02 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.02 OrthoFinder output from all 47 species
Cba_g06407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75131 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75380 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G033500.1 Ceric.03G033500 not classified & original description: pacid=50573115... 0.03 OrthoFinder output from all 47 species
Ceric.06G051200.1 CRR22, Ceric.06G051200 not classified & original description: pacid=50620844... 0.03 OrthoFinder output from all 47 species
Ceric.09G005800.1 CRR22, Ceric.09G005800 not classified & original description: pacid=50588191... 0.03 OrthoFinder output from all 47 species
Ceric.12G021700.1 Ceric.12G021700 not classified & original description: pacid=50601871... 0.03 OrthoFinder output from all 47 species
Ceric.19G052100.1 Ceric.19G052100 not classified & original description: pacid=50575616... 0.03 OrthoFinder output from all 47 species
Ceric.21G077300.1 Ceric.21G077300 not classified & original description: pacid=50604263... 0.03 OrthoFinder output from all 47 species
Ceric.21G089400.1 Ceric.21G089400 not classified & original description: pacid=50603367... 0.03 OrthoFinder output from all 47 species
Ceric.23G032200.1 Ceric.23G032200 not classified & original description: pacid=50610511... 0.03 OrthoFinder output from all 47 species
Ceric.29G083700.1 Ceric.29G083700 not classified & original description: pacid=50625623... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.02 OrthoFinder output from all 47 species
Dac_g14985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g17090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19629 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g39845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48641 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g36335 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18859 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03944 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05885 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43486 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018767 No alias not classified & original description: CDS=1-2967 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0124.g021576 No alias not classified & original description: CDS=1-3150 0.03 OrthoFinder output from all 47 species
Spa_g08783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23501 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56845 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04035 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042255 ribosome assembly IEP HCCA
BP GO:0042256 cytosolic ribosome assembly IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 228 275
IPR002885 Pentatricopeptide_repeat 447 493
IPR002885 Pentatricopeptide_repeat 566 593
IPR002885 Pentatricopeptide_repeat 331 361
IPR002885 Pentatricopeptide_repeat 537 557
No external refs found!