Aliases : PIR1, MAP1, AUX1, WAV5
Description : auxin transporter *(AUX/LAX) & original description: none
Gene families : OG0000450 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000450_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Dde_g13567 | |
Cluster | HCCA: Cluster_62 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g015688 | LAX2 | auxin transporter *(AUX/LAX) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g051933 | PIR1, MAP1, AUX1, WAV5 | auxin transporter *(AUX/LAX) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g04772 | LAX1 | auxin transporter *(AUX/LAX) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g18331 | LAX2 | auxin transporter *(AUX/LAX) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g07014 | LAX2 | auxin transporter *(AUX/LAX) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g13238 | PIR1, MAP1, AUX1, WAV5 | auxin transporter *(AUX/LAX) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0003.g002022 | LAX1 | auxin transporter *(AUX/LAX) & original description: CDS=1-399 | 0.04 | OrthoFinder output from all 47 species | |
Smo439204 | PIR1, MAP1, AUX1, WAV5 | Solute transport.carrier-mediated transport.APC... | 0.05 | OrthoFinder output from all 47 species | |
Smo78094 | LAX1 | Solute transport.carrier-mediated transport.APC... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g06764 | LAX1 | auxin transporter *(AUX/LAX) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g14891 | PIR1, MAP1, AUX1, WAV5 | auxin transporter *(AUX/LAX) & original description: none | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003684 | damaged DNA binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006289 | nucleotide-excision repair | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
MF | GO:0008017 | microtubule binding | IEP | HCCA |
MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0010498 | proteasomal protein catabolic process | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016872 | intramolecular lyase activity | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
BP | GO:0030163 | protein catabolic process | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013057 | AA_transpt_TM | 47 | 440 |
No external refs found! |