AMTR_s00024p00250140 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.330

Description : Solute transport.carrier-mediated transport.BART superfamily.AEC family.auxin efflux transporter (PIN-type)


Gene families : OG_01_0000353 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000353_tree ,
OG_02_0000237 (LandPlants) Phylogenetic Tree(s): OG_02_0000237_tree ,
OG_03_0000465 (SeedPlants) Phylogenetic Tree(s): OG_03_0000465_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00250140
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Zm00001e024071_P002 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Smo99301 No alias Solute transport.carrier-mediated transport.BART... 0.01 LandPlants
Zm00001e015800_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 LandPlants
AT1G70940 PIN3, ATPIN3 Auxin efflux carrier family protein 0.01 SeedPlants
Zm00001e024071_P002 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.01 SeedPlants
Zm00001e037682_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.01 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004776 Mem_trans 10 664
No external refs found!