Aliases : CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1, DDM1
Description : chromatin remodeling factor *(DDM1) & original description: none
Gene families : OG0000102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000102_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00059p00063470 | CHR01, CHR1,... | Chromatin organisation.DNA methylation.RNA-independent... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.02G040400.1 | CHR5, Ceric.02G040400 | not classified & original description: pacid=50584074... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g42061 | CHR5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01018979001 | CHR01, CHR1,... | ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os09g27060.1 | CHR01, CHR1,... | chromatin remodeling factor (DDM1) | 0.03 | OrthoFinder output from all 47 species | |
Msp_g44223 | CHR11 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g04407 | CHR01, CHR1,... | chromatin remodeling factor *(DDM1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g16805 | CHR01, CHR1,... | chromatin remodeling factor *(DDM1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g15409 | CHR5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0168.g024260 | CHR01, CHR1,... | not classified & original description: CDS=245-1573 | 0.03 | OrthoFinder output from all 47 species | |
Smo102612 | CHR5 | Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Tin_g31900 | CHR5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e017643_P001 | CHR17, Zm00001e017643 | chromatin remodeling factor (Iswi) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
BP | GO:0006414 | translational elongation | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
BP | GO:0007165 | signal transduction | IEP | HCCA |
MF | GO:0008017 | microtubule binding | IEP | HCCA |
MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
No external refs found! |