AMTR_s00024p00249000 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.324

Description : Cell cycle.organelle machineries.DNA replication.genome stability maintenance.RecG-type DNA translocase


Gene families : OG_01_0006026 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006026_tree ,
OG_02_0006566 (LandPlants) Phylogenetic Tree(s): OG_02_0006566_tree ,
OG_03_0006445 (SeedPlants) Phylogenetic Tree(s): OG_03_0006445_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00249000
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
Cre01.g021850 No alias ATP-dependent DNA helicase homolog RECG, chloroplastic... 0.02 Archaeplastida
LOC_Os02g48100.1 No alias DNA translocase (RecG) 0.02 LandPlants
Solyc05g008040.4.1 No alias DNA translocase (RecG) 0.02 LandPlants
GSVIVT01011753001 No alias Cell cycle.organelle machineries.DNA replication.genome... 0.02 SeedPlants
LOC_Os02g48100.1 No alias DNA translocase (RecG) 0.02 SeedPlants
Solyc05g008040.4.1 No alias DNA translocase (RecG) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 598 765
IPR001650 Helicase_C 849 921
No external refs found!