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  5. Lfl_g17005

Lfl_g17005 (AtOCT4, 4-Oct)


Aliases : AtOCT4, 4-Oct

Description : organic cation transporter *(OCT) & original description: none


Gene families : OG0001321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001321_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g17005
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Adi_g086045 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51667 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70561 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g22710.1 2-Oct, ATOCT2,... organic cation transporter (OCT) 0.03 OrthoFinder output from all 47 species
LOC_Os07g37454.1 2-Oct, ATOCT2,... organic cation transporter (OCT) 0.03 OrthoFinder output from all 47 species
LOC_Os07g37510.1 2-Oct, ATOCT2,... organic cation transporter (OCT) 0.04 OrthoFinder output from all 47 species
Pnu_g17192 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc10g074850.3.1 3-Oct, ATOCT3,... Organic cation/carnitine transporter 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR011701 MFS 491 654
IPR005828 MFS_sugar_transport-like 156 331
No external refs found!