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  5. Dde_g12222

Dde_g12222 (emb2746)


Aliases : emb2746

Description : exoribonuclease *(RNase J) & original description: none


Gene families : OG0003970 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003970_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g12222
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AT5G63420 emb2746 RNA-metabolising metallo-beta-lactamase family protein 0.02 OrthoFinder output from all 47 species
Aev_g14818 emb2746 exoribonuclease *(RNase J) & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g04183 emb2746 exoribonuclease *(RNase J) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001279 Metallo-B-lactamas 130 266
IPR011108 RMMBL 454 511
IPR044822 Myb_DNA-bind_4 840 924
No external refs found!