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Description : component *(PININ) of RNA quality control Exon Junction complex & original description: none
Gene families : OG0004599 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004599_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dde_g12214 | |
| Cluster | HCCA: Cluster_21 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g082737 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g09559 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g15611 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene37717.t1 | Aspi01Gene37717 | component *(PININ) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene37717.t2 | Aspi01Gene37717 | component *(PININ) of RNA quality control Exon Junction... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.07G024200.1 | Ceric.07G024200 | component *(PININ) of RNA quality control Exon Junction... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g49520.1 | LOC_Os03g49520 | component PININ of RNA quality control Exon Junction complex | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g08493 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g15018 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g10046 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g10098 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005379_P001 | Zm00001e005379 | component PININ of RNA quality control Exon Junction complex | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e012229_P001 | Zm00001e012229 | component PININ of RNA quality control Exon Junction complex | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003968 | RNA-dependent RNA polymerase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0017038 | protein import | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006786 | Pinin_SDK_MemA | 172 | 300 |
| No external refs found! |