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  5. Lfl_g16976

Lfl_g16976 (TRX P, TRX z)


Aliases : TRX P, TRX z

Description : cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ) & original description: none


Gene families : OG0002657 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002657_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g16976
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Aob_g00880 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.03 OrthoFinder output from all 47 species
Dac_g01998 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.07 OrthoFinder output from all 47 species
Dcu_g15316 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.05 OrthoFinder output from all 47 species
Msp_g12051 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.08 OrthoFinder output from all 47 species
Ppi_g01669 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.02 OrthoFinder output from all 47 species
Tin_g15301 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 120 218
No external refs found!