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  5. Dde_g11753

Dde_g11753


Description : not classified & original description: none


Gene families : OG0006152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g11753
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AT1G12250 No alias Pentapeptide repeat-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g015162 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g08842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04025 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cre17.g721700 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.01 OrthoFinder output from all 47 species
Dac_g13925 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06102 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01001267001 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.05 OrthoFinder output from all 47 species
Gb_01023 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.09 OrthoFinder output from all 47 species
LOC_Os02g42960.1 LOC_Os02g42960 Thylakoid lumenal protein TL20.3, chloroplastic... 0.06 OrthoFinder output from all 47 species
Mp8g12430.1 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.07 OrthoFinder output from all 47 species
Msp_g07925 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g05641 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g18142 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pp3c21_17930V3.1 Pp3c21_17930 Pentapeptide repeat-containing protein 0.02 OrthoFinder output from all 47 species
Ppi_g16845 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001784 No alias not classified & original description: CDS=1-996 0.07 OrthoFinder output from all 47 species
Sam_g15961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo96317 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.04 OrthoFinder output from all 47 species
Solyc08g079110.4.1 Solyc08g079110 Thylakoid lumenal protein TL20.3, chloroplastic... 0.03 OrthoFinder output from all 47 species
Spa_g08899 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g18697 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e015248_P001 Zm00001e015248 Thylakoid lumenal protein TL20.3, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 176 211
IPR001646 5peptide_repeat 109 148
No external refs found!