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  5. Lfl_g16880

Lfl_g16880


Description : alpha-class expansin & original description: none


Gene families : OG0005965 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005965_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g16880

Target Alias Description ECC score Gene Family Method Actions
Aev_g17360 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17379 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04711 No alias alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g10060 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67734 No alias alpha-class expansin & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g05196 No alias alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g23182 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18772 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56148 No alias alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g13913 No alias alpha-class expansin & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g36048 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g11608 No alias alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20454 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27814 No alias alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g54048 No alias alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g61538 No alias alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019976 No alias alpha-class expansin & original description: CDS=1-762 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019979 No alias alpha-class expansin & original description: CDS=1-759 0.03 OrthoFinder output from all 47 species
Spa_g07260 No alias alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51230 No alias alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0007265 Ras protein signal transduction IEP HCCA
BP GO:0007266 Rho protein signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!