Dde_g11077

Description : helicase UAP56 & original description: none

Gene families : OG0002123 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002123_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dde_g11077

Target	Alias	Description	ECC score	Gene Family Method
Aev_g13080	No alias	helicase UAP56 & original description: none	0.02	OrthoFinder output from all 47 species
Als_g32429	No alias	helicase UAP56 & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g33221	No alias	helicase UAP56 & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene09553.t1	Aspi01Gene09553	helicase UAP56 & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g12256	No alias	helicase UAP56 & original description: none	0.03	OrthoFinder output from all 47 species
Gb_04230	No alias	RNA helicase (Sub2). helicase component UAP56 of...	0.03	OrthoFinder output from all 47 species
Mp1g02350.1	No alias	RNA helicase (Sub2). helicase component UAP56 of...	0.02	OrthoFinder output from all 47 species
Ore_g07693	No alias	helicase UAP56 & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g50791	No alias	helicase UAP56 & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e026684_P001	Zm00001e026684	RNA helicase (Sub2). helicase component UAP56 of...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006457	protein folding	IEP	HCCA
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015293	symporter activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	275	382
IPR011545	DEAD/DEAH_box_helicase_dom	70	235

External Links

No external refs found!