Dde_g10564 (CLSY, CHR38)

Aliases : CLSY, CHR38

Description : regulatory protein *(CLSY3/4) of transacting siRNA pathway & original description: none

Gene families : OG0001261 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001261_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dde_g10564
Cluster	HCCA: Cluster_47

Target	Alias	Description	ECC score	Gene Family Method
AT2G16390	DMS1, DRD1, CHR35	SNF2 domain-containing protein / helicase...	0.02	OrthoFinder output from all 47 species
AT2G21450	CHR34	chromatin remodeling 34	0.03	OrthoFinder output from all 47 species
MA_15897g0010	chr31	RDR2-polymerase accessory protein (CLSY1/2)	0.03	OrthoFinder output from all 47 species
Pir_g36376	DMS1, DRD1, CHR35	component *(DRD1) of DNA methylation accessory complex &...	0.03	OrthoFinder output from all 47 species
Tin_g17151	DMS1, DRD1, CHR35	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEA	Interproscan
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032001	SAWADEE_dom	46	153
IPR000330	SNF2_N	808	1003
IPR001650	Helicase_C	1170	1266

External Links

No external refs found!