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  5. Dde_g10160

Dde_g10160 (ATL43)


Aliases : ATL43

Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0002999 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002999_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g10160

Target Alias Description ECC score Gene Family Method Actions
Ala_g04243 ATL43 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.02G098900.1 Ceric.02G098900 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Gb_13077 ATL43 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os06g48065.1 ATL43, LOC_Os06g48065 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Pnu_g30629 ATL43 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017194 ATL43 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 166 209
No external refs found!