Dde_g09668 (UBP1B)

Aliases : UBP1B

Description : stress granule assembly factor *(UBP1) & original description: none

Gene families : OG0002014 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002014_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dde_g09668

Target	Alias	Description	ECC score	Gene Family Method
Ala_g07833	UBP1B	stress granule assembly factor *(UBP1) & original...	0.04	OrthoFinder output from all 47 species
Als_g28427	UBP1B	stress granule assembly factor *(UBP1) & original...	0.04	OrthoFinder output from all 47 species
Azfi_s0743.g084783	UBP1B	stress granule assembly factor *(UBP1) & original...	0.02	OrthoFinder output from all 47 species
Mp1g10220.1	UBP1B	mRNA-binding regulatory factor (UBP1)	0.02	OrthoFinder output from all 47 species
Msp_g16815	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g07308	UBP1B	stress granule assembly factor *(UBP1) & original...	0.04	OrthoFinder output from all 47 species
Sam_g28502	No alias	stress granule assembly factor *(UBP1) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	192	262
IPR000504	RRM_dom	329	394
IPR000504	RRM_dom	107	172

External Links

No external refs found!