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  5. Dde_g09629

Dde_g09629 (SPA4)


Aliases : SPA4

Description : regulatory component *(SPA) of COP1-SPA light signal transduction E3 ubiquitin ligase complex & original description: none


Gene families : OG0000638 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000638_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g09629

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00174010 SPA3,... Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
Als_g07508 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
Als_g10779 SPA3 regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
Aob_g16328 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Aspi01Gene04009.t1 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008529 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Cba_g11979 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000852.18 FUS1, EMB168,... Protein modification.phosphorylation.PEK kinase 0.01 OrthoFinder output from all 47 species
LOC_Os01g52640.3 SPA4, LOC_Os01g52640 protein kinase (PEK) 0.04 OrthoFinder output from all 47 species
Lfl_g04186 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.03 OrthoFinder output from all 47 species
Nbi_g21337 SPA4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26130 SPA3 regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
Pir_g05451 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.03 OrthoFinder output from all 47 species
Ppi_g07004 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.05 OrthoFinder output from all 47 species
Smo171333 FUS1, EMB168,... External stimuli response.light.red/far red... 0.03 OrthoFinder output from all 47 species
Smo98534 SPA4 External stimuli response.light.red/far red... 0.02 OrthoFinder output from all 47 species
Zm00001e028209_P002 SPA4, Zm00001e028209 protein kinase (PEK). regulator component SPA of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 869 906
IPR001680 WD40_repeat 961 990
No external refs found!