Dde_g09268


Description : not classified & original description: none


Gene families : OG0004023 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004023_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g09268

Target Alias Description ECC score Gene Family Method Actions
Adi_g012590 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Ala_g08664 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g12875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21149 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05987 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08020 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Azfi_s0336.g065546 No alias not classified & original description: CDS=1-2493 0.05 OrthoFinder output from all 47 species
Ceric.12G037000.1 Ceric.12G037000 not classified & original description: pacid=50600637... 0.02 OrthoFinder output from all 47 species
Ceric.1Z219100.1 Ceric.1Z219100 not classified & original description: pacid=50617071... 0.03 OrthoFinder output from all 47 species
Dac_g16300 CRM3, HCF152 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g23808 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g23419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14876 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Len_g15440 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g16749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g13127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g06340 CRM3, HCF152 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g13290 EMB2279, EMB88 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g21700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08308 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14407 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Pir_g19507 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10297 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ppi_g42843 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15789 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37245 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g41235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49332 CRM3, HCF152 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 424 472
IPR002885 Pentatricopeptide_repeat 307 355
IPR002885 Pentatricopeptide_repeat 384 414
IPR002885 Pentatricopeptide_repeat 251 279
IPR002885 Pentatricopeptide_repeat 498 524
No external refs found!