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  5. Lfl_g16678

Lfl_g16678


Description : PLATZ-type transcription factor & original description: none


Gene families : OG0000228 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000228_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g16678

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00166000 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.02 OrthoFinder output from all 47 species
AT2G12646 No alias PLATZ transcription factor family protein 0.03 OrthoFinder output from all 47 species
Ala_g21703 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08279 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11638 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46803 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47610 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene13991.t2 Aspi01Gene13991 PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene49362.t1 Aspi01Gene49362 PLATZ-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0014.g013621 No alias PLATZ-type transcription factor & original description: CDS=1-465 0.02 OrthoFinder output from all 47 species
Cba_g01815 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.39G029500.1 Ceric.39G029500 PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cre16.g650400 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.01 OrthoFinder output from all 47 species
GSVIVT01012125001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 OrthoFinder output from all 47 species
GSVIVT01012869001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 OrthoFinder output from all 47 species
GSVIVT01027645001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 OrthoFinder output from all 47 species
GSVIVT01031446001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 OrthoFinder output from all 47 species
Gb_32018 No alias transcription factor (PLATZ) 0.06 OrthoFinder output from all 47 species
LOC_Os02g09070.1 LOC_Os02g09070 transcription factor (PLATZ) 0.04 OrthoFinder output from all 47 species
MA_10310g0010 No alias transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
MA_107063g0010 No alias transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
MA_12209g0020 No alias transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Nbi_g11386 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12568 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24743 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g25448 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g27584 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10046 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g27974 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32497 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63891 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002735 No alias PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0150.g023339 No alias PLATZ-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0246.g026698 No alias PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g36725 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g036130.3.1 Solyc02g036130 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Spa_g13178 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g15843 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29503 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09888 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013865_P001 Zm00001e013865 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006734 PLATZ 68 139
No external refs found!