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  5. Dde_g08996

Dde_g08996


Description : transcriptional co-activator *(BET/GTE) & original description: none


Gene families : OG0000177 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000177_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g08996
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00204730 evm_27.TU.AmTr_v1... Transcription factor GTE11 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G17790 No alias DNA-binding bromodomain-containing protein 0.02 OrthoFinder output from all 47 species
Cba_g05911 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Mp2g14370.1 GTE4 transcriptional co-activator (BET/GTE) 0.05 OrthoFinder output from all 47 species
Ore_g25908 GTE6 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Pp3c12_15290V3.1 NPX1, Pp3c12_15290 bromodomain and extraterminal domain protein 10 0.01 OrthoFinder output from all 47 species
Zm00001e015036_P002 NPX1, Zm00001e015036 transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001487 Bromodomain 60 145
IPR027353 NET_dom 178 239
No external refs found!