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  5. Dde_g08230

Dde_g08230


Description : not classified & original description: none


Gene families : OG0007043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g08230

Target Alias Description ECC score Gene Family Method Actions
Ala_g14952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52662.t1 Aspi01Gene52662 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16645 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre09.g398650 No alias Cactin OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dac_g32754 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g58590.1 LOC_Os03g58590 Cactin OS=Arabidopsis thaliana (sp|f4i2j8|catin_arath : 644.0) 0.02 OrthoFinder output from all 47 species
Mp1g18180.1 No alias Cactin OS=Arabidopsis thaliana (sp|f4i2j8|catin_arath : 645.0) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR019134 Cactin_C 548 672
IPR018816 Cactin_central 194 391
No external refs found!