Lfl_g16581


Description : not classified & original description: none


Gene families : OG0029944 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0029944_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g16581

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene51655.t1 Aspi01Gene51655 not classified & original description: none 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016073 snRNA metabolic process IEP HCCA
BP GO:0016180 snRNA processing IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034472 snRNA 3'-end processing IEP HCCA
BP GO:0034477 U6 snRNA 3'-end processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 73 102
IPR002885 Pentatricopeptide_repeat 510 540
IPR002885 Pentatricopeptide_repeat 482 509
IPR002885 Pentatricopeptide_repeat 410 437
IPR002885 Pentatricopeptide_repeat 582 606
IPR002885 Pentatricopeptide_repeat 308 338
IPR002885 Pentatricopeptide_repeat 280 302
IPR002885 Pentatricopeptide_repeat 179 218
IPR046848 E_motif 627 687
No external refs found!