Dde_g07740


Description : not classified & original description: none


Gene families : OG0003627 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003627_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g07740

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00133480 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
AMTR_s00047p00213160 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
AT1G30010 No alias Intron maturase, type II family protein 0.03 OrthoFinder output from all 47 species
Adi_g021888 No alias nMAT1/2 type-I mitochondrial RNA splicing factor &... 0.04 OrthoFinder output from all 47 species
Als_g01930 No alias nMAT1/2 type-I mitochondrial RNA splicing factor &... 0.04 OrthoFinder output from all 47 species
Ceric.09G034500.1 Ceric.09G034500 not classified & original description: pacid=50588493... 0.04 OrthoFinder output from all 47 species
Dcu_g03916 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Gb_04055 No alias nMAT1/2 type-I mitochondrial RNA splicing factor 0.03 OrthoFinder output from all 47 species
Msp_g24502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007424 No alias nMAT1/2 type-I mitochondrial RNA splicing factor &... 0.04 OrthoFinder output from all 47 species
Solyc08g077385.1.1 Solyc08g077385 nMAT1/2 type-I mitochondrial RNA splicing factor 0.03 OrthoFinder output from all 47 species
Tin_g13529 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000458_P001 Zm00001e000458 nMAT1/2 type-I mitochondrial RNA splicing factor 0.02 OrthoFinder output from all 47 species
Zm00001e000640_P001 Zm00001e000640 nMAT1/2 type-I mitochondrial RNA splicing factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA

No InterPro domains available for this sequence

No external refs found!