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  5. Dde_g07431

Dde_g07431


Description : not classified & original description: none


Gene families : OG0006517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006517_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g07431
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00133p00054340 evm_27.TU.AmTr_v1... PsbP domain-containing protein 3, chloroplastic... 0.05 OrthoFinder output from all 47 species
AT1G76450 No alias Photosystem II reaction center PsbP family protein 0.03 OrthoFinder output from all 47 species
Aev_g38210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08526 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g18492 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06130 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g12145 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.16G011400.1 Ceric.16G011400 not classified & original description: pacid=50589110... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021682.6 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g03626 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g12329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00853 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013427001 No alias PsbP domain-containing protein 3, chloroplastic... 0.08 OrthoFinder output from all 47 species
LOC_Os08g40160.1 LOC_Os08g40160 PsbP domain-containing protein 3, chloroplastic... 0.04 OrthoFinder output from all 47 species
Len_g08264 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g05889 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_135370g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp8g10040.1 No alias PsbP domain-containing protein 3, chloroplastic... 0.02 OrthoFinder output from all 47 species
Nbi_g06533 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g30711 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08785 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0227.g026375 No alias not classified & original description: CDS=59-778 0.03 OrthoFinder output from all 47 species
Sam_g22535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003568_P001 Zm00001e003568 PsbP domain-containing protein 3, chloroplastic... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 83 242
No external refs found!