1. Home
  2. Species
  3. Davallia denticulata
  4. Sequence
  5. Dde_g07210

Dde_g07210 (HSL1, VAL2, HSI2-L1)


Aliases : HSL1, VAL2, HSI2-L1

Description : LAV-VAL-type transcription factor & original description: none


Gene families : OG0001383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001383_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g07210
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
Adi_g103348 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os07g37610.1 HSI2, VAL1,... transcription factor (LAV-VAL) 0.03 OrthoFinder output from all 47 species
Lfl_g28672 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g16375 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14528 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 273 373
IPR011124 Znf_CW 546 588
No external refs found!