Dde_g06655 (RPL2.1)

Aliases : RPL2.1

Description : component *(uL2c) of large plastid ribosomal-subunit proteome & original description: none

Gene families : OG0002194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002194_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dde_g06655
Cluster	HCCA: Cluster_34

Target	Alias	Description	ECC score	Gene Family Method
ATCG00830	RPL2.1	ribosomal protein L2	0.04	OrthoFinder output from all 47 species
ATCG01310	RPL2.2	ribosomal protein L2	0.04	OrthoFinder output from all 47 species
Aev_g14432	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.1	OrthoFinder output from all 47 species
Aev_g24286	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Ala_g18429	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Ala_g38158	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Als_g02244	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Als_g02447	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Aop_g61267	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Ceric.05G042700.1	RPL2.1, Ceric.05G042700	not classified & original description: pacid=50577724...	0.09	OrthoFinder output from all 47 species
Ceric.07G017400.1	RPL2.1, Ceric.07G017400	not classified & original description: pacid=50626616...	0.06	OrthoFinder output from all 47 species
Ceric.38G009500.1	RPL2.1, Ceric.38G009500	not classified & original description: pacid=50580350...	0.1	OrthoFinder output from all 47 species
Cre07.g348850	RPL2.1	50S ribosomal protein L2, chloroplastic OS=Chara vulgaris	0.01	OrthoFinder output from all 47 species
Lfl_g13189	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Mp1g19370.1	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Nbi_g04996	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.12	OrthoFinder output from all 47 species
Nbi_g39693	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Ore_g43250	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.09	OrthoFinder output from all 47 species
Pir_g37334	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Smo137825	RPL2.1	Protein biosynthesis.organelle translation...	0.07	OrthoFinder output from all 47 species
Solyc00g500035.1.1	RPL2.1, Solyc00g500035	50S ribosomal protein L2, chloroplastic OS=Nicotiana...	0.03	OrthoFinder output from all 47 species
Solyc00g500079.1.1	RPL2.1, Solyc00g500079	50S ribosomal protein L2, chloroplastic OS=Nicotiana...	0.03	OrthoFinder output from all 47 species
Solyc00g500297.1.1	RPL2.1, Solyc00g500297	50S ribosomal protein L2, chloroplastic OS=Nicotiana...	0.03	OrthoFinder output from all 47 species
Solyc02g150102.1.1	RPL2.1, Solyc02g150102	50S ribosomal protein L2, chloroplastic OS=Aethionema...	0.03	OrthoFinder output from all 47 species
Spa_g56424	RPL2	component *(uL2m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Tin_g21720	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0003954	NADH dehydrogenase activity	IEP	HCCA
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	HCCA
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
BP	GO:0015994	chlorophyll metabolic process	IEP	HCCA
BP	GO:0015995	chlorophyll biosynthetic process	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0042440	pigment metabolic process	IEP	HCCA
BP	GO:0046148	pigment biosynthetic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022666	Rbsml_prot_L2_RNA-bd_dom	42	117
IPR022669	Ribosomal_L2_C	126	251

External Links

No external refs found!

Dde_g06655 (RPL2.1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation