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  5. Dde_g06213

Dde_g06213


Description : component *(SF3B2) of splicing factor 3B complex & original description: none


Gene families : OG0004021 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g06213

Target Alias Description ECC score Gene Family Method Actions
AT4G21660 No alias proline-rich spliceosome-associated (PSP) family protein 0.02 OrthoFinder output from all 47 species
Mp7g16820.1 No alias component SF3B2 of splicing factor 3B complex 0.02 OrthoFinder output from all 47 species
Pir_g65226 No alias component *(SF3B2) of splicing factor 3B complex &... 0.03 OrthoFinder output from all 47 species
Solyc03g006520.3.1 Solyc03g006520 component SF3B2 of splicing factor 3B complex 0.02 OrthoFinder output from all 47 species
Zm00001e013359_P002 Zm00001e013359 component SF3B2 of splicing factor 3B complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR006568 PSP_pro-rich 306 350
IPR007180 DUF382 172 297
No external refs found!