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  5. Dde_g06082

Dde_g06082 (CHR17)


Aliases : CHR17

Description : ATPase component *(CHR11/CHR17) of ISWI chromatin remodeling complexes & original description: none


Gene families : OG0000102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000102_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Dde_g06082

Target Alias Description ECC score Gene Family Method Actions
Als_g06850 PKR1, CHR4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000217.24 SYD, CHR3 Chromatin structure-remodeling complex protein SYD... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020960.24 CHR5 Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Ehy_g15984 SYD, CHR3 SMARCA component *(SYD/BRM/MINU) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g65850.1 PKL, GYM, CHR6,... CHD3-type chromatin-remodeling factor PICKLE... 0.02 OrthoFinder output from all 47 species
Ore_g10377 CHR17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16204 No alias SMARCA component *(SYD/BRM/MINU) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006338 chromatin remodeling IEA Interproscan
MF GO:0031491 nucleosome binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
InterPro domains Description Start Stop
IPR015195 SLIDE 910 1021
IPR000330 SNF2_N 206 483
IPR015194 ISWI_HAND-dom 768 844
IPR001650 Helicase_C 506 618
No external refs found!