Cpa|evm.model.tig00000754.23


Description : RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.Sm-D1 component


Gene families : OG_01_0004011 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004011_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000754.23
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00127560 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.02 Archaeplastida
AT3G07590 No alias Small nuclear ribonucleoprotein family protein 0.03 Archaeplastida
AT4G02840 No alias Small nuclear ribonucleoprotein family protein 0.01 Archaeplastida
Cre16.g665400 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.07 Archaeplastida
GSVIVT01014776001 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.01 Archaeplastida
LOC_Os02g37430.1 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.04 Archaeplastida
Mp1g03900.1 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.03 Archaeplastida
Pp3c13_22270V3.1 No alias Small nuclear ribonucleoprotein family protein 0.03 Archaeplastida
Pp3c5_16280V3.1 No alias Small nuclear ribonucleoprotein family protein 0.04 Archaeplastida
Pp3c9_610V3.1 No alias Small nuclear ribonucleoprotein family protein 0.03 Archaeplastida
Zm00001e007844_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e041053_P001 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 5 69
No external refs found!