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  5. Dde_g06068

Dde_g06068


Description : LIM-type transcription factor & original description: none


Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g06068

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00199510 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.LIM... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001741 WLIM1 LIM-type transcription factor & original description: CDS=1-612 0.02 OrthoFinder output from all 47 species
Solyc05g049870.3.1 Solyc05g049870 transcription factor (LIM) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 10 65
IPR001781 Znf_LIM 111 166
No external refs found!