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  5. Dde_g05952

Dde_g05952 (PUM3, APUM3)


Aliases : PUM3, APUM3

Description : not classified & original description: none


Gene families : OG0000583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000583_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g05952
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AT3G20250 PUM5, APUM5 pumilio 5 0.02 OrthoFinder output from all 47 species
Pnu_g09055 APUM4, PUM4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0136.g022409 APUM2, PUM2 not classified & original description: CDS=679-3840 0.04 OrthoFinder output from all 47 species
Tin_g05236 PUM3, APUM3 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 934 967
IPR001313 Pumilio_RNA-bd_rpt 753 785
IPR001313 Pumilio_RNA-bd_rpt 861 896
IPR001313 Pumilio_RNA-bd_rpt 789 822
IPR001313 Pumilio_RNA-bd_rpt 899 928
IPR001313 Pumilio_RNA-bd_rpt 717 751
IPR001313 Pumilio_RNA-bd_rpt 980 1009
IPR001313 Pumilio_RNA-bd_rpt 831 856
IPR012940 NABP 350 712
No external refs found!