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  5. Lfl_g16288

Lfl_g16288


Description : cation exchanger *(NCL/EF-CAX) & original description: none


Gene families : OG0000757 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000757_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g16288
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AT1G29020 No alias Calcium-binding EF-hand family protein 0.02 OrthoFinder output from all 47 species
Ala_g28095 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g16002 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29281 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g59636 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene07327.t2 Aspi01Gene07327 cation exchanger *(NCL/EF-CAX) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0009.g011783 No alias cation exchanger *(NCL/EF-CAX) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z041000.1 Ceric.1Z041000 cation exchanger *(NCL/EF-CAX) & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01014240001 No alias Solute transport.carrier-mediated transport.CDF... 0.03 OrthoFinder output from all 47 species
Gb_22444 No alias cation exchanger (NCL/EF-CAX) 0.03 OrthoFinder output from all 47 species
LOC_Os02g14980.1 LOC_Os02g14980 cation exchanger (NCL/EF-CAX) 0.03 OrthoFinder output from all 47 species
Len_g34847 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.09 OrthoFinder output from all 47 species
Lfl_g17606 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
MA_104140g0010 No alias cation exchanger (NCL/EF-CAX) 0.02 OrthoFinder output from all 47 species
MA_377000g0010 No alias cation exchanger (NCL/EF-CAX) 0.02 OrthoFinder output from all 47 species
Mp8g02300.1 No alias cation exchanger (NCL/EF-CAX) 0.03 OrthoFinder output from all 47 species
Mp8g02310.1 No alias cation exchanger (NCL/EF-CAX) 0.03 OrthoFinder output from all 47 species
Msp_g06025 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19546 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31579 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g10648 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g21562 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g29360 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32866 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59906 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g13051 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23473 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g006260.4.1 Solyc03g006260 cation exchanger (NCL/EF-CAX) 0.02 OrthoFinder output from all 47 species
Solyc04g039960.4.1 Solyc04g039960 Sodium/calcium exchanger NCL2 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Spa_g52188 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004837 NaCa_Exmemb 446 586
IPR004837 NaCa_Exmemb 105 281
No external refs found!