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  5. Dde_g04802

Dde_g04802


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g04802
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00261170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT5G62460 No alias RING/FYVE/PHD zinc finger superfamily protein 0.04 OrthoFinder output from all 47 species
Aob_g03275 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g23685 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11181 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g33860.1 LOC_Os08g33860 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Pir_g58767 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60879 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Solyc05g007660.2.1 Solyc05g007660 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e021220_P001 Zm00001e021220 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP HCCA
MF GO:0004017 adenylate kinase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
MF GO:0050145 nucleoside monophosphate kinase activity IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR022143 DUF3675 148 261
IPR011016 Znf_RING-CH 96 141
No external refs found!