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  5. Lfl_g16227

Lfl_g16227


Description : susceptibility factor *(EXA1) & original description: none


Gene families : OG0000708 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000708_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g16227
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00074580 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G24300 No alias GYF domain-containing protein 0.08 OrthoFinder output from all 47 species
AT1G27430 No alias GYF domain-containing protein 0.07 OrthoFinder output from all 47 species
Adi_g055823 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g126313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48838 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09024 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g17669 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37682 No alias susceptibility factor *(EXA1) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g14645 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22450 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17703 No alias susceptibility factor *(EXA1) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g08149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70568 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013373 No alias susceptibility factor *(EXA1) & original description: CDS=1-3141 0.03 OrthoFinder output from all 47 species
Azfi_s0052.g031617 No alias not classified & original description: CDS=1-4227 0.04 OrthoFinder output from all 47 species
Azfi_s0073.g037093 No alias not classified & original description: CDS=389-5539 0.03 OrthoFinder output from all 47 species
Azfi_s0448.g070692 No alias susceptibility factor *(EXA1) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.18G008600.1 Ceric.18G008600 susceptibility factor *(EXA1) & original description:... 0.08 OrthoFinder output from all 47 species
Ceric.18G048100.1 Ceric.18G048100 susceptibility factor *(EXA1) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.33G057600.1 Ceric.33G057600 susceptibility factor *(EXA1) & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.56 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g04272 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12629 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g14782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05846 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39021 No alias susceptibility factor *(EXA1) & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g04464 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000922001 No alias No description available 0.12 OrthoFinder output from all 47 species
GSVIVT01009695001 No alias No description available 0.1 OrthoFinder output from all 47 species
GSVIVT01033051001 No alias No description available 0.08 OrthoFinder output from all 47 species
LOC_Os01g69990.1 LOC_Os01g69990 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Len_g14158 No alias susceptibility factor *(EXA1) & original description: none 0.06 OrthoFinder output from all 47 species
Len_g20603 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g58877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10117g0030 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_10117g0040 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_10425836g0010 No alias susceptibility factor (EXA1) 0.06 OrthoFinder output from all 47 species
MA_10425836g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g07340.1 No alias susceptibility factor (EXA1) 0.05 OrthoFinder output from all 47 species
Msp_g20541 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03874 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20345 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16118 No alias susceptibility factor *(EXA1) & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g23458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g54992 No alias susceptibility factor *(EXA1) & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0164.g024075 No alias susceptibility factor *(EXA1) & original description: CDS=1-5616 0.03 OrthoFinder output from all 47 species
Sam_g11581 No alias susceptibility factor *(EXA1) & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g24517 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo438556 No alias No description available 0.05 OrthoFinder output from all 47 species
Smo438614 No alias No description available 0.08 OrthoFinder output from all 47 species
Solyc04g080240.4.1 Solyc04g080240 susceptibility factor (EXA1) 0.04 OrthoFinder output from all 47 species
Solyc05g015920.3.1 Solyc05g015920 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc05g015930.4.1 Solyc05g015930 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g14135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30700 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g55090 No alias susceptibility factor *(EXA1) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08422 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35687 No alias susceptibility factor *(EXA1) & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e028423_P003 Zm00001e028423 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e028424_P001 Zm00001e028424 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e032780_P001 Zm00001e032780 susceptibility factor (EXA1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR003169 GYF 589 633
No external refs found!