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  5. Dde_g04349

Dde_g04349


Description : DNA bending architectural protein *(HMG-B) & original description: none


Gene families : OG0000754 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000754_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g04349

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00177580 evm_27.TU.AmTr_v1... High mobility group B protein 9 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g057185 No alias DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
Gb_18463 No alias High mobility group B protein 15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_48961g0010 No alias High mobility group B protein 9 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_5840g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013036 No alias not classified & original description: CDS=1-1740 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013037 No alias not classified & original description: CDS=1-1950 0.04 OrthoFinder output from all 47 species
Spa_g01322 No alias DNA bending architectural protein *(HMG-B) & original... 0.06 OrthoFinder output from all 47 species
Tin_g02034 No alias DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Tin_g20455 No alias DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR001606 ARID_dom 59 143
IPR009071 HMG_box_dom 301 368
No external refs found!