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  5. Dde_g04320

Dde_g04320


Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (Zm00001e022977_P001download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g04320

Target Alias Description ECC score Gene Family Method Actions
AT1G48195 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene00104.t1 ZFN1, Aspi01Gene00104 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene06086.t1 HUA1, Aspi01Gene06086 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene29128.t1 ZFN1, Aspi01Gene29128 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene65607.t1 ZFN1, Aspi01Gene65607 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Cba_g06425 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ehy_g16531 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ehy_g30722 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Gb_37448 No alias C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Lfl_g01688 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
MA_1139g0010 ZFN1 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Nbi_g29158 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ore_g03223 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Pnu_g32665 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020073 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Smo45667 ZFN1 RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
Spa_g21682 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 12 37
IPR000571 Znf_CCCH 252 277
IPR000571 Znf_CCCH 60 84
IPR000571 Znf_CCCH 300 324
IPR000571 Znf_CCCH 107 132
No external refs found!