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  5. Dde_g03396

Dde_g03396


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g03396

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00250660 OTP84,... Pentatricopeptide repeat-containing protein At3g57430,... 0.05 OrthoFinder output from all 47 species
Adi_g023975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g084267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g100902 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g06320 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04857 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g05187 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21667 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37274 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18330 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23950 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g61293 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70076 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g21995 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G009800.1 Ceric.11G009800 not classified & original description: pacid=50594985... 0.06 OrthoFinder output from all 47 species
Ceric.18G000200.1 Ceric.18G000200 not classified & original description: pacid=50622455... 0.03 OrthoFinder output from all 47 species
Ceric.21G062600.1 Ceric.21G062600 not classified & original description: pacid=50603664... 0.03 OrthoFinder output from all 47 species
Ceric.22G064700.1 Ceric.22G064700 not classified & original description: pacid=50614857... 0.04 OrthoFinder output from all 47 species
Dac_g09872 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08317 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g43430.2 LOC_Os04g43430 RNA editing factor (MEF12) 0.03 OrthoFinder output from all 47 species
Lfl_g07307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31108 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g45774 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g46086 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g47517 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g08923 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26958 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29069 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43122 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07439 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13330 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g29120 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo45004 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Tin_g17805 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g44640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR046848 E_motif 540 587
IPR002885 Pentatricopeptide_repeat 219 266
IPR002885 Pentatricopeptide_repeat 319 367
IPR002885 Pentatricopeptide_repeat 117 164
IPR002885 Pentatricopeptide_repeat 421 467
IPR002885 Pentatricopeptide_repeat 17 65
IPR002885 Pentatricopeptide_repeat 496 518
IPR002885 Pentatricopeptide_repeat 294 314
No external refs found!