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Aliases : ATUBC7, UBC7
Description : E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1 E3 ubiquitin ligase complex & original description: none
Gene families : OG0001574 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001574_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dde_g03186 | |
| Cluster | HCCA: Cluster_23 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aop_g03063 | ATUBC7, UBC7 | E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01034196001 | UBC13 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g38550.1 | ATUBC7, UBC7,... | component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10278819g0010 | UBC13 | E2 ubiquitin-conjugating component Ubc7/13/14 of HRD1 E3... | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g07670.1 | ATUBC7, UBC7 | component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g44963 | ATUBC7, UBC7 | E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g16559 | ATUBC7, UBC7 | E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g30985 | ATUBC7, UBC7 | E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g06542 | ATUBC7, UBC7 | E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g12722 | UBC13 | E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g02618 | ATUBC7, UBC7 | E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g42072 | ATUBC7, UBC7 | E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g011430.3.1 | ATUBC7, UBC7,... | component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g02541 | ATUBC7, UBC7 | E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027244_P001 | ATUBC7, UBC7,... | component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e028778_P002 | ATUBC7, UBC7,... | E2 ubiquitin-conjugating component Ubc7/13/14 of HRD1 E3... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e031834_P002 | ATUBC7, UBC7,... | component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0004478 | methionine adenosyltransferase activity | IEP | HCCA |
| MF | GO:0005484 | SNAP receptor activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | HCCA |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0030674 | protein-macromolecule adaptor activity | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
| BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| MF | GO:0060090 | molecular adaptor activity | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000608 | UBQ-conjugat_E2 | 10 | 159 |
| No external refs found! |