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  5. Dde_g03001

Dde_g03001


Description : not classified & original description: none


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g03001

Target Alias Description ECC score Gene Family Method Actions
Ehy_g16323 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g73410.1 PRAF1, LOC_Os01g73410 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
LOC_Os05g46740.1 LOC_Os05g46740 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013591 Brevis_radix_dom 1113 1168
IPR001849 PH_domain 15 124
IPR027988 BRX_N 911 938
IPR000408 Reg_chr_condens 492 541
IPR000408 Reg_chr_condens 544 593
IPR000408 Reg_chr_condens 429 477
IPR000408 Reg_chr_condens 374 425
IPR000408 Reg_chr_condens 598 645
IPR000408 Reg_chr_condens 323 371
IPR000306 Znf_FYVE 649 715
No external refs found!