1. Home
  2. Species
  3. Davallia denticulata
  4. Sequence
  5. Dde_g02976

Dde_g02976 (ATCBP80, ABH1, ENS, CBP80)


Aliases : ATCBP80, ABH1, ENS, CBP80

Description : component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex & original description: none


Gene families : OG0004633 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004633_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g02976

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021589.24 ATCBP80, ABH1, ENS, CBP80 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.01 OrthoFinder output from all 47 species
Cre12.g524100 No alias RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.02 OrthoFinder output from all 47 species
GSVIVT01037230001 ATCBP80, ABH1, ENS, CBP80 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.02 OrthoFinder output from all 47 species
Solyc10g005530.3.1 ATCBP80, ABH1,... component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR015174 MIF4G-like_typ-2 495 806
IPR015172 MIF4G-like_typ-1 336 460
IPR003890 MIF4G-like_typ-3 38 219
No external refs found!