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  5. Dde_g02252

Dde_g02252 (FLN1)


Aliases : FLN1

Description : cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1) & original description: none


Gene families : OG0007280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g02252

Target Alias Description ECC score Gene Family Method Actions
Ceric.1Z102700.1 FLN1, Ceric.1Z102700 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.02 OrthoFinder output from all 47 species
LOC_Os01g63220.2 FLN1, LOC_Os01g63220 PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.03 OrthoFinder output from all 47 species
Nbi_g04266 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.04 OrthoFinder output from all 47 species
Pir_g48861 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g16839 No alias cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.05 OrthoFinder output from all 47 species
Solyc09g011850.4.1 FLN1, Solyc09g011850 PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
CC GO:0032299 ribonuclease H2 complex IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR011611 PfkB_dom 157 504
No external refs found!