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  5. Lfl_g15977

Lfl_g15977 (HTA6)


Aliases : HTA6

Description : histone *(H2A) & original description: none


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g15977

Target Alias Description ECC score Gene Family Method Actions
Ala_g34046 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09905 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28663 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g21750.1 GAMMA-H2AX,... histone (H2A) 0.02 OrthoFinder output from all 47 species
Nbi_g27681 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08324 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c10_13610V3.1 GAMMA-H2AX,... gamma histone variant H2AX 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0210.g025887 GAMMA-H2AX,... histone *(H2A) & original description: CDS=1-531 0.03 OrthoFinder output from all 47 species
Zm00001e020483_P001 HTA6, Zm00001e020483 histone (H2A) 0.02 OrthoFinder output from all 47 species
Zm00001e033014_P001 HTA6, Zm00001e033014 histone (H2A) 0.02 OrthoFinder output from all 47 species
Zm00001e039735_P001 GAMMA-H2AX,... histone (H2A) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 51 130
IPR032454 Histone_H2A_C 133 166
No external refs found!