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  5. Dde_g02028

Dde_g02028


Description : chalcone isomerase & original description: none


Gene families : OG0002319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002319_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g02028
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00075600 evm_27.TU.AmTr_v1... Probable chalcone--flavonone isomerase 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT5G05270 No alias Chalcone-flavanone isomerase family protein 0.05 OrthoFinder output from all 47 species
Adi_g010980 No alias chalcone isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23437 No alias chalcone isomerase & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g07581 No alias chalcone isomerase & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g13956 No alias chalcone isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37318 No alias chalcone isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.09G016600.1 Ceric.09G016600 chalcone isomerase & original description:... 0.11 OrthoFinder output from all 47 species
Dac_g11451 No alias chalcone isomerase & original description: none 0.1 OrthoFinder output from all 47 species
Dcu_g49503 No alias chalcone isomerase & original description: none 0.1 OrthoFinder output from all 47 species
Ehy_g11422 No alias chalcone isomerase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032685001 No alias Probable chalcone--flavonone isomerase 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os12g02370.2 LOC_Os12g02370 Probable chalcone--flavonone isomerase 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g01030 No alias chalcone isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g30159 No alias chalcone isomerase & original description: none 0.08 OrthoFinder output from all 47 species
MA_502949g0010 No alias Probable chalcone--flavonone isomerase 3 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Mp4g03560.1 No alias Fatty-acid-binding protein 3, chloroplastic... 0.02 OrthoFinder output from all 47 species
Msp_g25257 No alias chalcone isomerase & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g31384 No alias chalcone isomerase & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g11170 No alias chalcone isomerase & original description: none 0.06 OrthoFinder output from all 47 species
Pp3c4_25770V3.1 Pp3c4_25770 Chalcone-flavanone isomerase family protein 0.02 OrthoFinder output from all 47 species
Ppi_g38923 No alias chalcone isomerase & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g14645 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo227414 No alias Probable chalcone--flavonone isomerase 3 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Solyc05g052240.3.1 Solyc05g052240 Probable chalcone--flavonone isomerase 3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Spa_g03063 No alias chalcone isomerase & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g10892 No alias chalcone isomerase & original description: none 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016872 intramolecular lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR016087 Chalcone_isomerase 9 207
No external refs found!