Dde_g01828

Description : histone *(H3) & original description: none

Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dde_g01828

Target	Alias	Description	ECC score	Gene Family Method
Ehy_g18977	No alias	histone *(H3) & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os12g22680.1	LOC_Os12g22680	histone (H3)	0.03	OrthoFinder output from all 47 species
Len_g06032	No alias	histone *(H3) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g20676	No alias	histone *(H3) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g25103	No alias	histone *(H3) & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g02325	No alias	histone H3 variant *(CENH3) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g19098	No alias	histone *(H3) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007202	No alias	not classified & original description: CDS=224-661	0.02	OrthoFinder output from all 47 species
Sam_g06113	No alias	histone *(H3) & original description: none	0.02	OrthoFinder output from all 47 species
Smo78992	No alias	Chromatin organisation.histones.H3-type histone	0.03	OrthoFinder output from all 47 species
Spa_g46951	No alias	histone *(H3) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e018263_P001	Zm00001e018263	histone (H3)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007125	Histone_H2A/H2B/H3	1	132

External Links

No external refs found!