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  5. Lfl_g15927

Lfl_g15927


Description : E3 ubiquitin ligase *(RBR-Helicase) & original description: none


Gene families : OG0007068 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007068_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g15927

Target Alias Description ECC score Gene Family Method Actions
Ala_g02717 No alias E3 ubiquitin ligase *(RBR-Helicase) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g17667 No alias E3 ubiquitin ligase *(RBR-Helicase) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12094 No alias E3 ubiquitin ligase *(RBR-Helicase) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02055 No alias E3 ubiquitin ligase *(RBR-Helicase) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15288 No alias E3 ubiquitin ligase *(RBR-Helicase) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 1029 1095
IPR011709 DEAD-box_helicase_OB_fold 816 893
IPR007502 Helicase-assoc_dom 653 745
IPR011545 DEAD/DEAH_box_helicase_dom 263 412
IPR001650 Helicase_C 474 591
IPR002867 IBR_dom 1582 1643
IPR018957 Znf_C3HC4_RING-type 1514 1540
No external refs found!