1. Home
  2. Species
  3. Davallia denticulata
  4. Sequence
  5. Dde_g01293

Dde_g01293


Description : adaptor component *(ClpS) of chloroplast Clp-type protease complex & original description: none


Gene families : OG0005952 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005952_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g01293

Target Alias Description ECC score Gene Family Method Actions
Aev_g05087 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.07 OrthoFinder output from all 47 species
Ala_g00971 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.06 OrthoFinder output from all 47 species
Als_g00481 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Aop_g02009 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Ceric.39G010100.1 Ceric.39G010100 adaptor component *(ClpS) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000241.124 No alias Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Ehy_g03330 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
LOC_Os08g33540.1 LOC_Os08g33540 adaptor component ClpS of chloroplast Clp-type protease complex 0.02 OrthoFinder output from all 47 species
Pir_g00333 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Smo69252 No alias Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Tin_g00248 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Zm00001e004147_P001 Zm00001e004147 adaptor component ClpS of chloroplast Clp-type protease complex 0.04 OrthoFinder output from all 47 species
Zm00001e022443_P001 Zm00001e022443 adaptor component ClpS of chloroplast Clp-type protease complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0030163 protein catabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR003769 ClpS_core 88 154
No external refs found!