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  5. Lfl_g15877

Lfl_g15877


Description : component *(PsbX) of PS-II complex & original description: none


Gene families : OG0002177 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002177_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g15877

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00218080 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.03 OrthoFinder output from all 47 species
AT2G06520 PSBX photosystem II subunit X 0.03 OrthoFinder output from all 47 species
Adi_g024522 PSBX component *(PsbX) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g024523 PSBX component *(PsbX) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g048424 PSBX component *(PsbX) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g10239 PSBX component *(PsbX) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27184 PSBX component *(PsbX) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55668 No alias component *(PsbX) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Als_g55991 PSBX component *(PsbX) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15623 PSBX component *(PsbX) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58924.t1 PSBX, Aspi01Gene58924 component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G082200.1 PSBX, Ceric.04G082200 component *(PsbX) of PS-II complex & original... 0.05 OrthoFinder output from all 47 species
Ceric.24G060900.1 PSBX, Ceric.24G060900 component *(PsbX) of PS-II complex & original... 0.08 OrthoFinder output from all 47 species
Dcu_g21257 PSBX component *(PsbX) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g31006 PSBX component *(PsbX) of PS-II complex & original description: none 0.11 OrthoFinder output from all 47 species
Dde_g21199 PSBX component *(PsbX) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035449001 PSBX Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.05 OrthoFinder output from all 47 species
Gb_07296 PSBX component PsbX of PS-II complex 0.03 OrthoFinder output from all 47 species
LOC_Os03g22370.1 PSBX, LOC_Os03g22370 component PsbX of PS-II complex 0.06 OrthoFinder output from all 47 species
LOC_Os07g47640.1 PSBX, LOC_Os07g47640 component PsbX of PS-II complex 0.02 OrthoFinder output from all 47 species
Len_g19235 No alias component *(PsbX) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17843 No alias component *(PsbX) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Mp6g21460.1 PSBX component PsbX of PS-II complex 0.06 OrthoFinder output from all 47 species
Pir_g48365 PSBX component *(PsbX) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06188 PSBX component *(PsbX) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30737 No alias component *(PsbX) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Pp3c5_17290V3.1 PSBX, Pp3c5_17290 photosystem II subunit X 0.02 OrthoFinder output from all 47 species
Ppi_g04809 PSBX component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g24668 No alias component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002436 PSBX component *(PsbX) of PS-II complex & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0155.g023606 PSBX component *(PsbX) of PS-II complex & original... 0.03 OrthoFinder output from all 47 species
Sam_g04554 No alias component *(PsbX) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Solyc05g025600.1.1 PSBX, Solyc05g025600 component PsbX of PS-II complex 0.08 OrthoFinder output from all 47 species
Solyc12g150101.1.1 PSBX, Solyc12g150101 component PsbX of PS-II complex 0.06 OrthoFinder output from all 47 species
Spa_g35692 PSBX component *(PsbX) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g07238 PSBX component *(PsbX) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g16593 PSBX component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025856_P001 PSBX, Zm00001e025856 component PsbX of PS-II complex 0.03 OrthoFinder output from all 47 species
Zm00001e035834_P001 PSBX, Zm00001e035834 component PsbX of PS-II complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR009518 PSII_PsbX 70 106
No external refs found!