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  5. Dde_g00947

Dde_g00947 (PUB9, ATPUB9)


Aliases : PUB9, ATPUB9

Description : E3 ubiquitin ligase *(SAUL) & original description: none


Gene families : OG0000782 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000782_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g00947
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00118190 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Ala_g06698 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13185.t1 PUB44, SAUL1,... E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G001500.1 PUB44, SAUL1,... E3 ubiquitin ligase *(SAUL) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.08G057000.1 Ceric.08G057000 E3 ubiquitin ligase *(SAUL) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.25G052400.1 Ceric.25G052400 E3 ubiquitin ligase *(SAUL) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g12042 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g00928 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01027197001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
LOC_Os01g72000.1 LOC_Os01g72000 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
MA_63057g0020 No alias E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
MA_703456g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g26780.1 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Msp_g01241 No alias E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13565 No alias E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32045 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g068490.4.1 Solyc01g068490 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
Solyc01g096200.4.1 Solyc01g096200 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
Solyc09g083060.4.1 Solyc09g083060 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g11352 No alias E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12195 No alias E3 ubiquiTin ligase *(SAUL) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12825 PUB44, SAUL1, ATPUB44 E3 ubiquiTin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018652_P001 Zm00001e018652 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000225 Armadillo 530 568
IPR000225 Armadillo 570 612
IPR003613 Ubox_domain 263 330
No external refs found!