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  5. Dde_g00941

Dde_g00941 (CHB3, ATSWI3D)


Aliases : CHB3, ATSWI3D

Description : SMARCC component *(SWI3) of chromatin remodeling complex & original description: none


Gene families : OG0000817 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000817_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g00941

Target Alias Description ECC score Gene Family Method Actions
Aev_g43378 SWI3A, CHB1, ATSWI3A SMARCC component *(SWI3) of chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
LOC_Os04g40420.1 SWI3A, CHB1,... component BAF255/170 of chromatin remodeling complex 0.02 OrthoFinder output from all 47 species
MA_10426514g0020 CHB4, SWI3C, ATSWI3C component BAF255/170 of chromatin remodeling complex 0.02 OrthoFinder output from all 47 species
Solyc06g060120.3.1 CHB4, SWI3C,... component BAF255/170 of chromatin remodeling complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR000433 Znf_ZZ 295 332
IPR007526 SWIRM 132 220
IPR001005 SANT/Myb 354 396
IPR032451 SMARCC_C 648 722
No external refs found!