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  5. Dde_g00829

Dde_g00829 (MLH1, ATMLH1)


Aliases : MLH1, ATMLH1

Description : component *(MLH1) of MLH1-PMS1 heterodimer & original description: none


Gene families : OG0003563 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003563_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g00829

Target Alias Description ECC score Gene Family Method Actions
AT4G09140 MLH1, ATMLH1 MUTL-homologue 1 0.03 OrthoFinder output from all 47 species
Aev_g29114 MLH1, ATMLH1 component *(MLH1) of MLH1-PMS1 heterodimer & original... 0.02 OrthoFinder output from all 47 species
Ala_g12715 MLH1, ATMLH1 component *(MLH1) of MLH1-PMS1 heterodimer & original... 0.03 OrthoFinder output from all 47 species
Msp_g22008 MLH1, ATMLH1 component *(MLH1) of MLH1-PMS1 heterodimer & original... 0.03 OrthoFinder output from all 47 species
Sam_g24394 No alias component *(MLH1) of MLH1-PMS1 heterodimer & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006298 mismatch repair IEA Interproscan
MF GO:0030983 mismatched DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1990380 K48-linked deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR013507 DNA_mismatch_S5_2-like 225 346
IPR032189 Mlh1_C 443 733
No external refs found!